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System Requirements
and Compiler issues
Please check our recommendations for
the computer system and compilers.
Known problems with DMAREL
- d packing types from MOLPAK have density out by a factor of 2.
Known problems with previous release version (1.11) of DMACRYS
- There are some problems with symmetry reduction.
- DMACRYS does not work for spherical ions (eg Cl-).
Known problems with previous release version (1.10) of NEIGHCRYS
- It standardises all OH bond lengths to 0.976 Å (neutron value
from Allen, F. H.; Kennard, O.; Watson, D. G.; Brammer, L.; Orpen, A.
G.; Taylor, R. Tables of bond lengths determined by x-ray and neutron
diffraction. Part 1. Bond lengths in Organic compounds. Journal of the
Chemical Society-Perkin Transactions 2 1987, (12), S1-S19.), which is
not appropriate for carboxylic acids or water.
- An extra line, reporting the number of times the primitive cell appears
in the unit cell, was introduced, for use with DMAflex2
- NEIGHCRYS assigns S as silicon for .fdat files, although .res files
it is correctly assigned as sulfur.
Current release versions
DMACRYS version 2.0.2 and NEIGHCRYS version 2.0.2
- These versions of the codes have been developed to deal with spherical
ions, and so are not compatible with version 1.
Please email Louise if there
is anything you want to add to this page. If you spot a new problem,
let her know, or if you have anything further to add to an existing
problem. Also, if you have solved the problem, email
Louise to remove it from the list.
Targets for new development version DMACRYS 2.1.0 and NEIGHCRYS
2.1.0
- Addition of splines to smooth off potential at cutoff distances,
and hence give better numerical derivatives with moderate cutoffs
- Inclusion of induction energy using distributed dipolar polarisability
models
- Include (damped) C6 C8 and C10 isotropic dispersion
- Ensure linear molecules can be used
- Ensure P3 space groups work
Known limitations of programs
- NEIGHCRYS copes with only some Z'<1 input files.
- Automated symmetry reduction is not possible with custom potentials
(particularly for anisotropic repulsion), because of the need to
generate the atoms typing and local axes for the new independent
molecule in the asymmetric unit cell.
- Only one Tang-Toennies damping parameter can be specified for
the entire molecule.
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